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» Efficient Testing of Large Graphs
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BMCBI
2007
102views more  BMCBI 2007»
14 years 9 months ago
Setting up a large set of protein-ligand PDB complexes for the development and validation of knowledge-based docking algorithms
Background: The number of algorithms available to predict ligand-protein interactions is large and ever-increasing. The number of test cases used to validate these methods is usua...
Luis A. Diago, Persy Morell, Longendri Aguilera, E...
PVLDB
2010
129views more  PVLDB 2010»
14 years 8 months ago
iGraph: A Framework for Comparisons of Disk-Based Graph Indexing Techniques
Graphs are of growing importance in modeling complex structures such as chemical compounds, proteins, images, and program dependence. Given a query graph Q, the subgraph isomorphi...
Wook-Shin Han, Jinsoo Lee, Minh-Duc Pham, Jeffrey ...
ALGORITHMICA
2006
163views more  ALGORITHMICA 2006»
14 years 9 months ago
Building Large Phylogenetic Trees on Coarse-Grained Parallel Machines
Phylogenetic analysis is an area of computational biology concerned with the reconstruction of evolutionary relationships between organisms, genes, and gene families. Maximum likel...
Thomas M. Keane, Andrew J. Page, Thomas J. Naughto...
CIKM
2010
Springer
14 years 4 months ago
Mining networks with shared items
Recent advances in data processing have enabled the generation of large and complex graphs. Many researchers have developed techniques to investigate informative structures within...
Jun Sese, Mio Seki, Mutsumi Fukuzaki
ISBI
2004
IEEE
15 years 10 months ago
Grid-Enabled Automatic Construction of A Two-Chamber Cardiac PDM from a Large Database of Dynamic 3D Shapes
Point Distribution Modelling (PDM) is an efficient generative technique that can be used to incorporate statistical shape priors into image analysis methods like Active Shape Mode...
Alejandro F. Frangi, Loic Boisrobert, Marcos Lauce...