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» Efficient Variants of the ICP Algorithm
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GECCO
2005
Springer
136views Optimization» more  GECCO 2005»
15 years 3 months ago
MeSwarm: memetic particle swarm optimization
In this paper, a novel variant of particle swarm optimization (PSO), named memetic particle swarm optimization algorithm (MeSwarm), is proposed for tackling the overshooting probl...
Bo-Fu Liu, Hung-Ming Chen, Jian-Hung Chen, Shiow-F...
RECOMB
2009
Springer
15 years 10 months ago
New Perspectives on Gene Family Evolution: Losses in Reconciliation and a Link with Supertrees
Reconciliation between a set of gene trees and a species tree is the most commonly used approach to infer the duplication and loss events in the evolution of gene families, given a...
Cedric Chauve, Nadia El-Mabrouk
VLDB
2004
ACM
161views Database» more  VLDB 2004»
15 years 9 months ago
Supporting top-k join queries in relational databases
Ranking queries produce results that are ordered on some computed score. Typically, these queries involve joins, where users are usually interested only in the top-k join results....
Ihab F. Ilyas, Walid G. Aref, Ahmed K. Elmagarmid
67
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ALIFE
2008
14 years 9 months ago
A Model of the Quorum Sensing System in Vibrio fischeri Using P Systems
Quorum sensing is a cell density dependent gene regulation system that allows an entire population of bacterial cells to communicate in order to regulate the expression of certain ...
Francisco José Romero-Campero, Mario J. P&e...
BMCBI
2006
137views more  BMCBI 2006»
14 years 9 months ago
A classification-based framework for predicting and analyzing gene regulatory response
Background: We have recently introduced a predictive framework for studying gene transcriptional regulation in simpler organisms using a novel supervised learning algorithm called...
Anshul Kundaje, Manuel Middendorf, Mihir Shah, Chr...