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BMCBI
2006
113views more  BMCBI 2006»
13 years 6 months ago
GibbsST: a Gibbs sampling method for motif discovery with enhanced resistance to local optima
Background: Computational discovery of transcription factor binding sites (TFBS) is a challenging but important problem of bioinformatics. In this study, improvement of a Gibbs sa...
Kazuhito Shida
BMCBI
2005
110views more  BMCBI 2005»
13 years 6 months ago
Discovery of protein-protein interactions using a combination of linguistic, statistical and graphical information
Background: The rapid publication of important research in the biomedical literature makes it increasingly difficult for researchers to keep current with significant work in their...
James W. Cooper, Aaron Kershenbaum
BALT
2006
13 years 10 months ago
Introducing Softness into Inductive Queries on String Databases
In many application domains (e.g., WWW mining, molecular biology), large string datasets are available and yet under-exploited. The inductive database framework assumes that both s...
Ieva Mitasiunaite, Jean-François Boulicaut
DKE
2006
157views more  DKE 2006»
13 years 6 months ago
XML structural delta mining: Issues and challenges
Recently, there is an increasing research efforts in XML data mining. These research efforts largely assumed that XML documents are static. However, in reality, the documents are ...
Qiankun Zhao, Ling Chen 0002, Sourav S. Bhowmick, ...
BMCBI
2010
160views more  BMCBI 2010»
13 years 6 months ago
Identification of functional hubs and modules by converting interactome networks into hierarchical ordering of proteins
Background: Protein-protein interactions play a key role in biological processes of proteins within a cell. Recent high-throughput techniques have generated protein-protein intera...
Young-Rae Cho, Aidong Zhang