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SSDBM
2010
IEEE
220views Database» more  SSDBM 2010»
15 years 1 months ago
Prefix Tree Indexing for Similarity Search and Similarity Joins on Genomic Data
Similarity search and similarity join on strings are important for applications such as duplicate detection, error detection, data cleansing, or comparison of biological sequences....
Astrid Rheinländer, Martin Knobloch, Nicky Ho...
SSDBM
2010
IEEE
133views Database» more  SSDBM 2010»
14 years 7 months ago
PrefIndex: An Efficient Supergraph Containment Search Technique
Graphs are prevailingly used in many applications to model complex data structures. In this paper, we study the problem of supergraph containment search. To avoid the NP-complete s...
Gaoping Zhu, Xuemin Lin, Wenjie Zhang, Wei Wang, H...
ICPR
2010
IEEE
15 years 24 days ago
Spatial Representation for Efficient Sequence Classification
We present a general, simple feature representation of sequences that allows efficient inexact matching, comparison and classification of sequential data. This approach, recently ...
Pavel Kuksa, Vladimir Pavlovic
103
Voted
ICPPW
2009
IEEE
14 years 7 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
TKDE
2002
127views more  TKDE 2002»
14 years 9 months ago
Efficient Join-Index-Based Spatial-Join Processing: A Clustering Approach
A join-index is a data structure used for processing join queries in databases. Join-indices use precomputation techniques to speed up online query processing and are useful for da...
Shashi Shekhar, Chang-Tien Lu, Sanjay Chawla, Siva...