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» Efficient protein alignment algorithm for protein search
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GECCO
2006
Springer
220views Optimization» more  GECCO 2006»
15 years 3 months ago
A comparative study of immune system based genetic algorithms in dynamic environments
Diversity and memory are two major mechanisms used in biology to keep the adaptability of organisms in the everchanging environment in nature. These mechanisms can be integrated i...
Shengxiang Yang
110
Voted
BIOINFORMATICS
2007
151views more  BIOINFORMATICS 2007»
14 years 12 months ago
A new protein-protein docking scoring function based on interface residue properties
Motivation: Protein–protein complexes are known to play key roles in many cellular processes. However, they are often not accessible to experimental study because of their low s...
Julie Bernauer, Jérôme Azé, Jo...
RECOMB
2004
Springer
16 years 1 days ago
A random graph approach to NMR sequential assignment
Nuclear magnetic resonance (NMR) spectroscopy allows scientists to study protein structure, dynamics and interactions in solution. A necessary first step for such applications is ...
Chris Bailey-Kellogg, Sheetal Chainraj, Gopal Pand...
BMCBI
2010
119views more  BMCBI 2010»
14 years 12 months ago
Coherent pipeline for biomarker discovery using mass spectrometry and bioinformatics
Background: Robust biomarkers are needed to improve microbial identification and diagnostics. Proteomics methods based on mass spectrometry can be used for the discovery of novel ...
Ali Al-Shahib, Raju Misra, Nadia Ahmod, Min Fang, ...
BMCBI
2008
173views more  BMCBI 2008»
14 years 12 months ago
Improved machine learning method for analysis of gas phase chemistry of peptides
Background: Accurate peptide identification is important to high-throughput proteomics analyses that use mass spectrometry. Search programs compare fragmentation spectra (MS/MS) o...
Allison Gehrke, Shaojun Sun, Lukasz A. Kurgan, Nat...