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» Encodings of the Sequence Constraint
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CP
2006
Springer
15 years 3 months ago
Revisiting the Sequence Constraint
Many combinatorial problems, such as car sequencing and rostering, feature sequence constraints, restricting the number of occurrences of certain values in every subsequence of a g...
Willem Jan van Hoeve, Gilles Pesant, Louis-Martin ...
NAR
2007
106views more  NAR 2007»
14 years 11 months ago
INFO-RNA - a server for fast inverse RNA folding satisfying sequence constraints
INFO-RNA is a new web server for designing RNA sequences that fold into a user given secondary structure. Furthermore, constraints on the sequence can be specified, e.g. one can r...
Anke Busch, Rolf Backofen
CONSTRAINTS
2008
95views more  CONSTRAINTS 2008»
14 years 12 months ago
Efficient Sequence Alignment with Side-Constraints by Cluster Tree Elimination
Aligning DNA and protein sequences is a core technique in molecular biology. Often, it is desirable to include partial prior knowledge and conditions in an alignment. Going beyond...
Sebastian Will, Anke Busch, Rolf Backofen
SAC
2006
ACM
15 years 5 months ago
Looking for monotonicity properties of a similarity constraint on sequences
Constraint-based mining techniques on sequence databases have been studied extensively the last few years and efficient algorithms enable to compute complete collections of patte...
Ieva Mitasiunaite, Jean-François Boulicaut
KDID
2003
93views Database» more  KDID 2003»
15 years 1 months ago
A Framework for Frequent Sequence Mining under Generalized Regular Expression Constraints
This paper provides a framework for the extraction of frequent sequences satisfying a given regular expression (RE) constraint. We take advantage of the information contained in th...
Hunor Albert-Lorincz, Jean-François Boulica...