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» Encodings of the Sequence Constraint
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BMCBI
2008
144views more  BMCBI 2008»
14 years 12 months ago
Local conservation scores without a priori assumptions on neutral substitution rates
Background: Comparative genomics aims to detect signals of evolutionary conservation as an indicator of functional constraint. Surprisingly, results of the ENCODE project revealed...
Janis Dingel, Pavol Hanus, Niccolò Leonardi...
LPAR
2005
Springer
15 years 5 months ago
Matching with Regular Constraints
We describe a sound, terminating, and complete matching algorithm for terms built over flexible arity function symbols and context, function, sequence, and individual variables. C...
Temur Kutsia, Mircea Marin
BIBM
2010
IEEE
161views Bioinformatics» more  BIBM 2010»
14 years 10 months ago
Cis-regulatory module detection using constraint programming
We propose a method for finding CRMs in a set of co-regulated genes. Each CRM consists of a set of binding sites of transcription factors. We wish to find CRMs involving the same t...
Tias Guns, Hong Sun, Kathleen Marchal, Siegfried N...
WIAMIS
2009
IEEE
15 years 6 months ago
Detection of pan and zoom in soccer sequences based on H.264/AVC motion information
Unsupervised detection of pan and zoom in soccer sequences allows automatic classification of shots and match analysis. In this work we propose a pan and zoom (both in and out) d...
Luca Superiori, Markus Rupp
DATE
2005
IEEE
125views Hardware» more  DATE 2005»
15 years 5 months ago
Hybrid BIST Based on Repeating Sequences and Cluster Analysis
We present a hybrid BIST approach that extracts the most frequently occurring sequences from deterministic test patterns; these extracted sequences are stored on-chip. We use clus...
Lei Li, Krishnendu Chakrabarty