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KES
2004
Springer
15 years 10 months ago
Extracting Biochemical Reaction Kinetics from Time Series Data
We consider the problem of inferring kinetic mechanisms for biochemical reactions from time series data. Using a priori knowledge about the structure of chemical reaction kinetics ...
Edmund J. Crampin, Patrick E. McSharry, Santiago S...
DCC
1999
IEEE
15 years 9 months ago
The Effect of Flexible Parsing for Dynamic Dictionary Based Data Compression
We report on the performance evaluation of greedy parsing with a single step lookahead, denoted as flexible parsing. We also introduce a new fingerprint based data structure which...
Yossi Matias, Nasir Rajpoot, Süleyman Cenk Sa...
COMPSAC
2004
IEEE
15 years 8 months ago
Spatial Data Query Support in Peer-to-Peer Systems
Recently distributed hash table (DHT) mechanisms have been proposed to manage data in very large, structured peer-to-peer (P2P) systems. DHT algorithms provide efficient exact-mat...
Roger Zimmermann, Wei-Shinn Ku, Haojun Wang
BMCBI
2010
163views more  BMCBI 2010»
15 years 5 months ago
Integration of open access literature into the RCSB Protein Data Bank using BioLit
Background: Biological data have traditionally been stored and made publicly available through a variety of on-line databases, whereas biological knowledge has traditionally been ...
Andreas Prlic, Marco A. Martinez, Dimitris Dimitro...
BMCBI
2008
103views more  BMCBI 2008»
15 years 5 months ago
Parameter estimation for robust HMM analysis of ChIP-chip data
Background: Tiling arrays are an important tool for the study of transcriptional activity, proteinDNA interactions and chromatin structure on a genome-wide scale at high resolutio...
Peter Humburg, David Bulger, Glenn Stone