Traditionally, research in identifying structured entities in documents has proceeded independently of document categorization research. In this paper, we observe that these two t...
Protein sequence alignments are more reliable the shorter the evolutionary distance. Here, we align distantly related proteins using many closely spaced intermediate sequences as ...
We introduce a model of DNA sequence evolution which can account for biases in mutation rates that depend on the identity of the neighboring bases. An analytic solution for this c...
motif discovery problem abstracts the task of discovering short, conserved sites in genomic DNA. Pevzner and Sze recently described a precise combinatorial formulation of motif di...
Abstract. Finding appropriate parameter values for Evolutionary Algorithms (EAs) is one of the persistent challenges of Evolutionary Computing. In recent publications we showed how...