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» Evaluating Parallel Computing Systems in Bioinformatics
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ESCIENCE
2005
IEEE
15 years 3 months ago
Bio-Workflows with BizTalk: Using a Commercial Workflow Engine for eScience
Workflow is an important enabling technology for eScience. Research into workflow systems for eScience has yielded several specialized workflow engines. In this paper we investiga...
Asbjørn Rygg, Scott Mann, Paul Roe, On Wong
HIPC
2005
Springer
15 years 3 months ago
Design and Implementation of the HPCS Graph Analysis Benchmark on Symmetric Multiprocessors
Graph theoretic problems are representative of fundamental computations in traditional and emerging scientific disciplines like scientific computing, computational biology and b...
David A. Bader, Kamesh Madduri
CLUSTER
2007
IEEE
15 years 4 months ago
Non-collective parallel I/O for global address space programming models
— Achieving high performance for out-of-core applications typically involves explicit management of the movement of data between the disk and the physical memory. We are developi...
Sriram Krishnamoorthy, Juan Piernas, Vinod Tippara...
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CLOUD
2010
ACM
15 years 2 months ago
Comet: batched stream processing for data intensive distributed computing
Batched stream processing is a new distributed data processing paradigm that models recurring batch computations on incrementally bulk-appended data streams. The model is inspired...
Bingsheng He, Mao Yang, Zhenyu Guo, Rishan Chen, B...
HPDC
2000
IEEE
15 years 2 months ago
Evaluation of Task Assignment Policies for Supercomputing Servers: The Case for Load Unbalancing and Fairness
While the MPP is still the most common architecture in supercomputer centers today, a simpler and cheaper machine configuration is growing increasingly common. This alternative s...
Bianca Schroeder, Mor Harchol-Balter