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BMCBI
2005
115views more  BMCBI 2005»
14 years 9 months ago
Statistical distributions of optimal global alignment scores of random protein sequences
Background: The inference of homology from statistically significant sequence similarity is a central issue in sequence alignments. So far the statistical distribution function un...
Hongxia Pang, Jiaowei Tang, Su-Shing Chen, Shiheng...
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BMCBI
2005
169views more  BMCBI 2005»
14 years 9 months ago
An adaptive method for cDNA microarray normalization
Background: Normalization is a critical step in analysis of gene expression profiles. For duallabeled arrays, global normalization assumes that the majority of the genes on the ar...
Yingdong Zhao, Ming-Chung Li, Richard Simon
BMCBI
2005
178views more  BMCBI 2005»
14 years 9 months ago
A quantization method based on threshold optimization for microarray short time series
Background: Reconstructing regulatory networks from gene expression profiles is a challenging problem of functional genomics. In microarray studies the number of samples is often ...
Barbara Di Camillo, Fatima Sanchez-Cabo, Gianna To...
CCR
2005
129views more  CCR 2005»
14 years 9 months ago
The problem of synthetically generating IP traffic matrices: initial recommendations
There exist a wide variety of network design problems that require a traffic matrix as input in order to carry out performance evaluation. The research community has not had at it...
Antonio Nucci, Ashwin Sridharan, Nina Taft
TON
2008
103views more  TON 2008»
14 years 9 months ago
On the race of worms, alerts, and patches
We study the effectiveness of automatic patching and quantify the speed of patch or alert dissemination required for worm containment. We focus on random scanning as this is repres...
Milan Vojnovic, Ayalvadi J. Ganesh