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NIPS
2003
14 years 11 months ago
ICA-based Clustering of Genes from Microarray Expression Data
We propose an unsupervised methodology using independent component analysis (ICA) to cluster genes from DNA microarray data. Based on an ICA mixture model of genomic expression pa...
Su-In Lee, Serafim Batzoglou
CMSB
2006
Springer
15 years 1 months ago
Possibilistic Approach to Biclustering: An Application to Oligonucleotide Microarray Data Analysis
Abstract. The important research objective of identifying genes with similar behavior with respect to different conditions has recently been tackled with biclustering techniques. I...
Maurizio Filippone, Francesco Masulli, Stefano Rov...
BMCBI
2008
104views more  BMCBI 2008»
14 years 9 months ago
Missing value imputation improves clustering and interpretation of gene expression microarray data
Background: Missing values frequently pose problems in gene expression microarray experiments as they can hinder downstream analysis of the datasets. While several missing value i...
Johannes Tuikkala, Laura Elo, Olli Nevalainen, Ter...
CBMS
2007
IEEE
15 years 4 months ago
An Unsupervised and Fully-Automated Image Analysis Method for cDNA Microarrays
Microarray gene expression image analysis is a labor-intensive task and requires human intervention since microarray images are contaminated with noise and artifacts while spots a...
Eleni Zacharia, Dimitrios E. Maroulis
BMCBI
2010
108views more  BMCBI 2010»
14 years 4 months ago
Preferred analysis methods for Affymetrix GeneChips. II. An expanded, balanced, wholly-defined spike-in dataset
Background: Concomitant with the rise in the popularity of DNA microarrays has been a surge of proposed methods for the analysis of microarray data. Fully controlled "spike-i...
Qianqian Zhu, Jeffrey C. Miecznikowski, Marc S. Ha...