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» Evaluation of Query Performance Prediction Methods by Range
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BMCBI
2006
129views more  BMCBI 2006»
15 years 4 months ago
Improved alignment quality by combining evolutionary information, predicted secondary structure and self-organizing maps
Background: Protein sequence alignment is one of the basic tools in bioinformatics. Correct alignments are required for a range of tasks including the derivation of phylogenetic t...
Tomas Ohlson, Varun Aggarwal, Arne Elofsson, Rober...
BMCBI
2004
114views more  BMCBI 2004»
15 years 4 months ago
Profiled support vector machines for antisense oligonucleotide efficacy prediction
Background: This paper presents the use of Support Vector Machines (SVMs) for prediction and analysis of antisense oligonucleotide (AO) efficacy. The collected database comprises ...
Gustavo Camps-Valls, Alistair M. Chalk, Antonio J....
ICDM
2003
IEEE
181views Data Mining» more  ICDM 2003»
15 years 9 months ago
Dynamic Weighted Majority: A New Ensemble Method for Tracking Concept Drift
Algorithms for tracking concept drift are important for many applications. We present a general method based on the Weighted Majority algorithm for using any online learner for co...
Jeremy Z. Kolter, Marcus A. Maloof
SAC
2009
ACM
15 years 11 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
BMCBI
2010
129views more  BMCBI 2010»
15 years 4 months ago
Automatic prediction of catalytic residues by modeling residue structural neighborhood
Background: Prediction of catalytic residues is a major step in characterizing the function of enzymes. In its simpler formulation, the problem can be cast into a binary classific...
Elisa Cilia, Andrea Passerini