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CSB
2005
IEEE
141views Bioinformatics» more  CSB 2005»
15 years 4 months ago
A Parallel Algorithm for Clustering Protein-Protein Interaction Networks
The increasing availability of interaction graphs requires new resource-efficient tools capable of extracting valuable biological knowledge from these networks. In this paper we ...
Qiaofeng Yang, Stefano Lonardi
BIBE
2010
IEEE
194views Bioinformatics» more  BIBE 2010»
14 years 7 months ago
Improved Immune Genetic Algorithm for Clustering Protein-Protein Interaction Network
Hamid Ravaee, Ali Masoudi-Nejad, Saeed Omidi, Ali ...
BIBE
2005
IEEE
154views Bioinformatics» more  BIBE 2005»
15 years 4 months ago
Effective Pre-Processing Strategies for Functional Clustering of a Protein-Protein Interactions Network
In this article we present novel preprocessing techniques, based on topological measures of the network, to identify clusters of proteins from Protein-protein interaction (PPI) ne...
Duygu Ucar, Srinivasan Parthasarathy, Sitaram Asur...
IJDMB
2007
114views more  IJDMB 2007»
14 years 10 months ago
A parallel edge-betweenness clustering tool for Protein-Protein Interaction networks
: The increasing availability of protein-protein interaction graphs (PPI) requires new efficient tools capable of extracting valuable biological knowledge from these networks. Amon...
Qiaofeng Yang, Stefano Lonardi
IJBRA
2007
88views more  IJBRA 2007»
14 years 10 months ago
Finding molecular complexes through multiple layer clustering of protein interaction networks
: Clustering protein-protein interaction networks (PINs) helps to identify complexes that guide the cell machinery. Clustering algorithms often create a flat clustering, without co...
Bill Andreopoulos, Aijun An, Xiangji Huang, Xiaoga...