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» Evaluation of the SRA Tool Using Data Mining Techniques
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BMCBI
2006
92views more  BMCBI 2006»
14 years 11 months ago
Recrafting the neighbor-joining method
Background: The neighbor-joining method by Saitou and Nei is a widely used method for constructing phylogenetic trees. The formulation of the method gives rise to a canonical (n3)...
Thomas Mailund, Gerth Stølting Brodal, Rolf...
BMCBI
2007
99views more  BMCBI 2007»
14 years 11 months ago
Statistical significance of cis-regulatory modules
Background: It is becoming increasingly important for researchers to be able to scan through large genomic regions for transcription factor binding sites or clusters of binding si...
Dustin E. Schones, Andrew D. Smith, Michael Q. Zha...
BMCBI
2006
157views more  BMCBI 2006»
14 years 11 months ago
Determination of the minimum number of microarray experiments for discovery of gene expression patterns
Background: One type of DNA microarray experiment is discovery of gene expression patterns for a cell line undergoing a biological process over a series of time points. Two import...
Fang-Xiang Wu, W. J. Zhang, Anthony J. Kusalik
CNSM
2010
14 years 9 months ago
DP+IP = design of efficient backup scheduling
Many industries experience an explosion in digital content. This explosion of electronic documents, along with new regulations and document retention rules, sets new requirements f...
Ludmila Cherkasova, Alex Zhang, Xiaozhou Li
SIGCOMM
2010
ACM
14 years 12 months ago
Greening backbone networks: reducing energy consumption by shutting off cables in bundled links
In backbone networks, the line cards that drive the links between neighboring routers consume a large amount of energy. Since these networks are typically overprovisioned, selecti...
Will Fisher, Martin Suchara, Jennifer Rexford