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» Evolution of Biological Complexity
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COCOON
2008
Springer
15 years 5 months ago
Quasi-bicliques: Complexity and Binding Pairs
Abstract. Protein-protein interactions (PPIs) are one of the most important mechanisms in cellular processes. To model protein interaction sites, recent studies have suggested to f...
Xiaowen Liu, Jinyan Li, Lusheng Wang
BIOSYSTEMS
2007
175views more  BIOSYSTEMS 2007»
15 years 4 months ago
Alternative routes and mutational robustness in complex regulatory networks
Alternative pathways through a gene regulation network connect a regulatory molecule to its (indirect) regulatory target via different intermediate regulators. We here show for tw...
Andreas Wagner, Jeremiah Wright
CLASSIFICATION
2006
103views more  CLASSIFICATION 2006»
15 years 4 months ago
On the Complexity of Ordinal Clustering
Abstract. Given a set of pairwise distances on a set of n points, constructing an edge-weighted tree whose leaves are these n points such that the tree distances would mimic the or...
Rahul Shah, Martin Farach-Colton
JMM2
2008
124views more  JMM2 2008»
15 years 4 months ago
Integrated Feature Selection and Clustering for Taxonomic Problems within Fish Species Complexes
As computer and database technologies advance rapidly, biologists all over the world can share biologically meaningful data from images of specimens and use the data to classify th...
Huimin Chen, Henry L. Bart Jr., Shuqing Huang
OOPSLA
2009
Springer
15 years 10 months ago
A market-based approach to software evolution
Software correctness has bedeviled the field of computer science since its inception. Software complexity has increased far more quickly than our ability to control it, reaching ...
David F. Bacon, Yiling Chen, David C. Parkes, Malv...