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» Evolution of Biological Complexity
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RECOMB
2009
Springer
16 years 5 months ago
Lifting Prediction to Alignment of RNA Pseudoknots
Prediction and alignment of RNA pseudoknot structures are NP-hard. Nevertheless, several efficient prediction algorithms by dynamic programming have been proposed for restricted cl...
Mathias Möhl, Rolf Backofen, Sebastian Will
126
Voted
RECOMB
2008
Springer
16 years 5 months ago
CompostBin: A DNA Composition-Based Algorithm for Binning Environmental Shotgun Reads
A major hindrance to studies of microbial diversity has been that the vast majority of microbes cannot be cultured in the laboratory and thus are not amenable to traditional method...
Sourav Chatterji, Ichitaro Yamazaki, Zhaojun Bai, ...
156
Voted
CIBCB
2008
IEEE
15 years 11 months ago
Very large scale ReliefF for genome-wide association analysis
— The genetic causes of many monogenic diseases have already been discovered. However, most common diseases are actually the result of complex nonlinear interactions between mult...
Margaret J. Eppstein, Paul Haake
134
Voted
ICPP
2007
IEEE
15 years 11 months ago
Efficient Parallel Algorithm for Optimal Three-Sequences Alignment
Sequence alignment is a fundamental problem in the computational biology. Many alignment methods have been proposed in the literature, such as pair-wise sequence alignment (2SA), ...
Chun-Yuan Lin, Chen Tai Huang, Yeh-Ching Chung, Ch...
132
Voted
EH
2005
IEEE
119views Hardware» more  EH 2005»
15 years 10 months ago
Evolutionary Computation Technologies for the Automated Design of Space Systems
The Evolvable Computation Group, at NASA’s Jet Propulsion Laboratory, is tasked with demonstrating the utility of computational engineering and computer optimized design for com...
Richard Terrile, Hrand Aghazarian, Michael I. Ferg...