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» Evolution of Biological Complexity
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BMCBI
2010
202views more  BMCBI 2010»
15 years 4 months ago
NeMo: Network Module identification in Cytoscape
Background: As the size of the known human interactome grows, biologists increasingly rely on computational tools to identify patterns that represent protein complexes and pathway...
Corban G. Rivera, Rachit Vakil, Joel S. Bader
APIN
2006
136views more  APIN 2006»
15 years 4 months ago
Cell modeling with reusable agent-based formalisms
Biologists are building increasingly complex models and simulations of cells and other biological entities, and are looking at alternatives to traditional representations. Making ...
Ken Webb, Tony White
BMCBI
2006
98views more  BMCBI 2006»
15 years 4 months ago
Optimised amino acid specific weighting factors for unbound protein docking
Background: One of the most challenging aspects of protein-protein docking is the inclusion of flexibility into the docking procedure. We developed a postfilter where the grid-rep...
Philipp Heuser, Dietmar Schomburg
BMCBI
2006
122views more  BMCBI 2006»
15 years 4 months ago
Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
TCSV
2010
14 years 11 months ago
Subsampled Block-Matching for Zoom Motion Compensated Prediction
Motion compensated prediction plays a vital role in achieving enormous video compression efficiency in advanced video coding standards. Most practical motion compensated prediction...
Lai-Man Po, Ka-Man Wong, Kwok-Wai Cheung, Ka-Ho Ng