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» Evolution of Biological Complexity
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169
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RECOMB
2003
Springer
16 years 4 months ago
An integrated probabilistic model for functional prediction of proteins
We develop an integrated probabilistic model to combine protein physical interactions, genetic interactions, highly correlated gene expression network, protein complex data, and d...
Minghua Deng, Ting Chen, Fengzhu Sun
125
Voted
RECOMB
2010
Springer
15 years 11 months ago
Genomic DNA k-mer Spectra: Models and Modalities
Background: The empirical frequencies of DNA k-mers in whole genome sequences provide an interesting perspective on genomic complexity, and the availability of large segments of g...
Benny Chor, David Horn, Nick Goldman, Yaron Levy, ...
113
Voted
RECOMB
2010
Springer
15 years 11 months ago
Dense Subgraphs with Restrictions and Applications to Gene Annotation Graphs
Abstract. In this paper, we focus on finding complex annotation patterns representing novel and interesting hypotheses from gene annotation data. We define a generalization of th...
Barna Saha, Allison Hoch, Samir Khuller, Louiqa Ra...
143
Voted
UC
2009
Springer
15 years 10 months ago
Brain Dynamics Promotes Function
Abstract. Dynamical structure in the brain promotes biological function. Natural scientists look for correlations between measured electrical signals and behavior or mental states....
Carlos Lourenço
116
Voted
ALMOB
2008
95views more  ALMOB 2008»
15 years 4 months ago
A stitch in time: Efficient computation of genomic DNA melting bubbles
Background: It is of biological interest to make genome-wide predictions of the locations of DNA melting bubbles using statistical mechanics models. Computationally, this poses th...
Eivind Tøstesen