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» Evolution of Biological Complexity
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CONCUR
2005
Springer
15 years 9 months ago
A Compositional Approach to the Stochastic Dynamics of Gene Networks
We propose a compositional approach to the dynamics of gene regulatory networks based on the stochastic π-calculus, and develop a representation of gene network elements which can...
Luca Cardelli
CIS
2004
Springer
15 years 9 months ago
Algorithms for Loosely Constrained Multiple Sequence Alignment
For finding accurate and biologically meaningful multiple sequence alignment, it is required to consider a loosely constrained version of multiple sequence alignment. This paper is...
Bin Song, Fengfeng Zhou, Guoliang Chen
CMSB
2004
Springer
15 years 9 months ago
Modelling Metabolic Pathways Using Stochastic Logic Programs-Based Ensemble Methods
In this paper we present a methodology to estimate rates of enzymatic reactions in metabolic pathways. Our methodology is based on applying stochastic logic learning in ensemble le...
Huma Lodhi, Stephen Muggleton
ICARIS
2004
Springer
15 years 9 months ago
Immune System Approaches to Intrusion Detection - A Review
The use of artificial immune systems in intrusion detection is an appealing concept for two reasons. Firstly, the human immune system provides the human body with a high level of ...
Uwe Aickelin, Julie Greensmith, Jamie Twycross
KELSI
2004
Springer
15 years 9 months ago
A Randomized Algorithm for Distance Matrix Calculations in Multiple Sequence Alignment
Multiple sequence alignment (MSA) is a vital problem in biology. Optimal alignment of multiple sequences becomes impractical even for a modest number of sequences [1] since the gen...
Sanguthevar Rajasekaran, Vishal Thapar, Hardik Dav...