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BMCBI
2008
147views more  BMCBI 2008»
13 years 6 months ago
Transmembrane helix prediction using amino acid property features and latent semantic analysis
Background: Prediction of transmembrane (TM) helices by statistical methods suffers from lack of sufficient training data. Current best methods use hundreds or even thousands of f...
Madhavi Ganapathiraju, Narayanas Balakrishnan, Raj...
BMCBI
2010
152views more  BMCBI 2010»
13 years 6 months ago
FITBAR: a web tool for the robust prediction of prokaryotic regulons
Background: The binding of regulatory proteins to their specific DNA targets determines the accurate expression of the neighboring genes. The in silico prediction of new binding s...
Jacques Oberto
NAR
2006
177views more  NAR 2006»
13 years 6 months ago
PUMA2 - grid-based high-throughput analysis of genomes and metabolic pathways
The PUMA2 system (available at http://compbio.mcs. 10 anl.gov/puma2) is an interactive, integrated bioinformatics environment for high-throughput genetic sequence analysis and met...
Natalia Maltsev, Elizabeth M. Glass, Dinanath Sula...
RECOMB
1999
Springer
13 years 10 months ago
Evolution of metabolisms: a new method for the comparison of metabolic pathways
The abundance of information provided by completely sequenced genomes de nes a starting point for new insights in the multilevel organization of organisms and their evolution. At ...
Christian V. Forst, Klaus Schulten
EMO
2009
Springer
140views Optimization» more  EMO 2009»
13 years 10 months ago
On Using Populations of Sets in Multiobjective Optimization
Abstract. Most existing evolutionary approaches to multiobjective optimization aim at finding an appropriate set of compromise solutions, ideally a subset of the Pareto-optimal se...
Johannes Bader, Dimo Brockhoff, Samuel Welten, Eck...