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» Evolutionary algorithms and dynamic programming
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BIBM
2007
IEEE
132views Bioinformatics» more  BIBM 2007»
15 years 11 months ago
A Divide-and-Conquer Implementation of Three Sequence Alignment and Ancestor Inference
In this paper, we present an algorithm to simultaneously align three biological sequences with affine gap model and infer their common ancestral sequence. Our algorithm can be fu...
Feng Yue, Jijun Tang
BIBE
2005
IEEE
126views Bioinformatics» more  BIBE 2005»
15 years 10 months ago
Highly Scalable and Accurate Seeds for Subsequence Alignment
We propose a method for finding seeds for the local alignment of two nucleotide sequences. Our method uses randomized algorithms to find approximate seeds. We present a dynamic ...
Abhijit Pol, Tamer Kahveci
ICDE
2009
IEEE
163views Database» more  ICDE 2009»
16 years 6 months ago
Distance-Based Representative Skyline
Given an integer k, a representative skyline contains the k skyline points that best describe the tradeoffs among different dimensions offered by the full skyline. Although this to...
Yufei Tao, Ling Ding, Xuemin Lin, Jian Pei
134
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MICCAI
2006
Springer
16 years 5 months ago
Hierarchical Part-Based Detection of 3D Flexible Tubes: Application to CT Colonoscopy
In this paper, we present a learning-based method for the detection and segmentation of 3D free-form tubular structures, such as the rectal tubes in CT colonoscopy. This method can...
Adrian Barbu, Luca Bogoni, Dorin Comaniciu
PERCOM
2003
ACM
16 years 4 months ago
Self-Routing in Pervasive Computing Environments Using Smart Messages
Smart Messages (SMs) are dynamic collections of code and data that migrate to nodes of interest in the network and execute on these nodes. A key challenge in programming pervasive...
Cristian Borcea, Chalermek Intanagonwiwat, Akhiles...