Sciweavers

1972 search results - page 315 / 395
» Evolutionary algorithms and dynamic programming
Sort
View
WABI
2005
Springer
120views Bioinformatics» more  WABI 2005»
15 years 10 months ago
Multiple Structural RNA Alignment with Lagrangian Relaxation
In contrast to proteins, many classes of functionally related RNA molecules show a rather weak sequence conservation but instead a fairly well conserved secondary structure. Hence ...
Markus Bauer, Gunnar W. Klau, Knut Reinert
ASPLOS
2008
ACM
15 years 6 months ago
Communication optimizations for global multi-threaded instruction scheduling
The recent shift in the industry towards chip multiprocessor (CMP) designs has brought the need for multi-threaded applications to mainstream computing. As observed in several lim...
Guilherme Ottoni, David I. August
IPPS
2000
IEEE
15 years 9 months ago
Reduction Optimization in Heterogeneous Cluster Environments
Network of workstation (NOW) is a cost-effective alternative to massively parallel supercomputers. As commercially available off-the-shelf processors become cheaper and faster, ...
Pangfeng Liu, Da-Wei Wang
BMCBI
2010
175views more  BMCBI 2010»
15 years 5 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
COMGEO
2012
ACM
14 years 18 days ago
Point-set embeddings of plane 3-trees
A straight-line drawing of a plane graph G is a planar drawing of G, where each vertex is drawn as a point and each edge is drawn as a straight line segment. Given a set S of n poi...
Rahnuma Islam Nishat, Debajyoti Mondal, Md. Saidur...