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BMCBI
2011
14 years 9 months ago
PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment
Background: The Monte Carlo simulation of sequence evolution is routinely used to assess the performance of phylogenetic inference methods and sequence alignment algorithms. Progr...
Botond Sipos, Tim Massingham, Gregory E. Jordan, N...
141
Voted
BMCBI
2006
161views more  BMCBI 2006»
15 years 3 months ago
A novel approach to phylogenetic tree construction using stochastic optimization and clustering
Background: The problem of inferring the evolutionary history and constructing the phylogenetic tree with high performance has become one of the major problems in computational bi...
Ling Qin, Yixin Chen, Yi Pan, Ling Chen
BMCBI
2007
172views more  BMCBI 2007»
15 years 3 months ago
msBayes: Pipeline for testing comparative phylogeographic histories using hierarchical approximate Bayesian computation
Background: Although testing for simultaneous divergence (vicariance) across different population-pairs that span the same barrier to gene flow is of central importance to evoluti...
Michael J. Hickerson, Eli Stahl, Naoki Takebayashi
EVOW
2010
Springer
15 years 8 months ago
Memory Design for Constrained Dynamic Optimization Problems
A proposal for a memory design is given that is suitable for solving constrained dynamic optimization problems by an evolutionary m. Based on ideas from abstract memory, two scheme...
Hendrik Richter
EH
1999
IEEE
127views Hardware» more  EH 1999»
15 years 7 months ago
A System for Intrinsic Evolution of Linear and Non-Linear Filters
A system for exploring intrinsic evolution of linear and non-linear filter systems is described. It consists of a testbed topology of operational amplifiers and linear or non-line...
Stuart J. Flockton, Kevin Sheehan