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ASAP
2004
IEEE
124views Hardware» more  ASAP 2004»
15 years 7 months ago
Biosequence Similarity Search on the Mercury System
Biosequence similarity search is an important application in modern molecular biology. Search algorithms aim to identify sets of sequences whose extensional similarity suggests a c...
Praveen Krishnamurthy, Jeremy Buhler, Roger D. Cha...
119
Voted
EH
2004
IEEE
106views Hardware» more  EH 2004»
15 years 7 months ago
How to Evolve the Head-Tail Pattern from Reaction-Diffusion Systems
The possible application of evolving artificial embryos to build functional machinery is a promising area of research. Unfortunately, there are still many fundamental problems to ...
Felix Streichert, Christian Spieth, Holger Ulmer, ...
GECCO
2008
Springer
141views Optimization» more  GECCO 2008»
15 years 5 months ago
Co-optimization algorithms
While coevolution has many parallels to natural evolution, methods other than those based on evolutionary principles may be used in the interactive fitness setting. In this paper...
Travis C. Service, Daniel R. Tauritz
BMCBI
2008
109views more  BMCBI 2008»
15 years 4 months ago
The meaning of alignment: lessons from structural diversity
Background: Protein structural alignment provides a fundamental basis for deriving principles of functional and evolutionary relationships. It is routinely used for structural cla...
Walter Pirovano, K. Anton Feenstra, Jaap Heringa
BIOINFORMATICS
2006
82views more  BIOINFORMATICS 2006»
15 years 4 months ago
ZooDDD: a cross-species database for digital differential display analysis
SUMMARY: In this paper, we combined EST information from the UniGene database and orthologous relationships from the Ensembl database to construct a ZooDDD database. The primary f...
Yun-Ching Chen, Chung-Der Hsiao, Wen-Dar Lin, Chun...