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CEC
2009
IEEE
15 years 4 months ago
Memetic algorithm with Local search chaining for large scale continuous optimization problems
Abstract— Memetic algorithms arise as very effective algorithms to obtain reliable and high accurate solutions for complex continuous optimization problems. Nowadays, high dimens...
Daniel Molina, Manuel Lozano, Francisco Herrera
BMCBI
2010
113views more  BMCBI 2010»
14 years 12 months ago
Efficient protein alignment algorithm for protein search
Background: Proteins show a great variety of 3D conformations, which can be used to infer their evolutionary relationship and to classify them into more general groups; therefore ...
Zaixin Lu, Zhiyu Zhao, Bin Fu
ICSM
2007
IEEE
15 years 6 months ago
A Maintainable Software Architecture for Fast and Modular Bioinformatics Sequence Search
Bioinformaticists use the Basic Local Alignment Search Tool (BLAST) to characterize an unknown sequence by comparing it against a database of known sequences, thus detecting evolu...
Jeremy S. Archuleta, Eli Tilevich, Wu-chun Feng
WEA
2007
Springer
114views Algorithms» more  WEA 2007»
15 years 6 months ago
Improving Tree Search in Phylogenetic Reconstruction from Genome Rearrangement Data
Abstract. A major task in evolutionary biology is to determine the ancestral relationships among the known species, a process generally referred as phylogenetic reconstruction. In ...
Fei Ye, Yan Guo, Andrew Lawson, Jijun Tang
PPSN
2010
Springer
14 years 9 months ago
Defining and Optimizing Indicator-Based Diversity Measures in Multiobjective Search
Abstract. In this paper, we elaborate how decision space diversity can be integrated into indicator-based multiobjective search. We introduce DIOP, the diversity integrating multio...
Tamara Ulrich, Johannes Bader, Lothar Thiele