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» Evolutionary sequence analysis of complete eukaryote genomes
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BMCBI
2006
140views more  BMCBI 2006»
14 years 9 months ago
MACSIMS : multiple alignment of complete sequences information management system
Background: In the post-genomic era, systems-level studies are being performed that seek to explain complex biological systems by integrating diverse resources from fields such as...
Julie D. Thompson, Arnaud Muller, Andrew M. Waterh...
NAR
2006
75views more  NAR 2006»
14 years 9 months ago
OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups
The OrthoMCL database (http://orthomcl.cbil.upenn. edu) houses ortholog group predictions for 55 spe10 cies, including 16 bacterial and 4 archaeal genomes representing phylogeneti...
Feng Chen, Aaron J. Mackey, Christian J. Stoeckert...
NAR
2010
106views more  NAR 2010»
14 years 4 months ago
InParanoid 7: new algorithms and tools for eukaryotic orthology analysis
The InParanoid project gathers proteomes of completely sequenced eukaryotic species plus Escherichia coli and calculates pairwise ortholog relationships among them. The new releas...
Gabriel Östlund, Thomas Schmitt, Kristoffer F...
CSB
2005
IEEE
223views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Automatic Protein Function Annotation through Candidate Ortholog Clusters from Incomplete Genomes
Annotation of protein function often arises in the context of partially complete genomes but is not adequately addressed. We present an annotation method by extracting ortholog cl...
Akshay Vashist, Casimir A. Kulikowski, Ilya B. Muc...
NAR
1998
94views more  NAR 1998»
14 years 9 months ago
SGD: Saccharomyces Genome Database
The Saccharomyces Genome Database (SGD) provides Internet access to the complete Saccharomyces cerevisiae genomic sequence, its genes and their products, the phenotypes of its mut...
J. Michael Cherry, Caroline Adler, Catherine A. Ba...