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» Evolving genetic regulatory networks for systems biology
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CN
2010
109views more  CN 2010»
14 years 9 months ago
A taxonomy of biologically inspired research in computer networking
The natural world is enormous, dynamic, incredibly diverse, and highly complex. Despite the inherent challenges of surviving in such a world, biological organisms evolve, self-org...
Michael Meisel, Vasileios Pappas, Lixia Zhang
BMCBI
2006
136views more  BMCBI 2006»
14 years 9 months ago
EMD: an ensemble algorithm for discovering regulatory motifs in DNA sequences
Background: Understanding gene regulatory networks has become one of the central research problems in bioinformatics. More than thirty algorithms have been proposed to identify DN...
Jianjun Hu, Yifeng D. Yang, Daisuke Kihara

Publication
234views
15 years 1 months ago
Evolution of Analog Networks using Local String Alignment on Highly Reorganizable Genomes
We introduce and apply a genetic representation for analog electronic circuits based on the association of character strings extracted from the genome with the terminals and param...
Claudio Mattiussi, Dario Floreano
RECOMB
2007
Springer
15 years 10 months ago
Network Motif Discovery Using Subgraph Enumeration and Symmetry-Breaking
The study of biological networks and network motifs can yield significant new insights into systems biology. Previous methods of discovering network motifs ? network-centric subgra...
Joshua A. Grochow, Manolis Kellis
CIBCB
2007
IEEE
14 years 11 months ago
Optimization of Bacterial Strains with Variable-Sized Evolutionary Algorithms
—In metabolic engineering it is difficult to identify which set of genetic manipulations will result in a microbial strain that achieves a desired production goal, due to the co...
Miguel Rocha, José P. Pinto, Isabel Rocha, ...