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BMCBI
2011
14 years 1 months ago
Structator: fast index-based search for RNA sequence-structure patterns
Background: The secondary structure of RNA molecules is intimately related to their function and often more conserved than the sequence. Hence, the important task of searching dat...
Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebas...
BMCBI
2008
138views more  BMCBI 2008»
14 years 9 months ago
Automated simultaneous analysis phylogenetics (ASAP): an enabling tool for phlyogenomics
Background: The availability of sequences from whole genomes to reconstruct the tree of life has the potential to enable the development of phylogenomic hypotheses in ways that ha...
Indra Neil Sarkar, Mary G. Egan, Gloria M. Coruzzi...
POS
1998
Springer
15 years 1 months ago
Swizzle Barrier Optimizations for Orthogonal Persistence in Java
Swizzling refers to the translation of object references from an external, persistent format to an internal, transient format used during application execution. Eager swizzling sc...
Kumar Brahnmath, Nathaniel Nystrom, Antony L. Hosk...
VIS
2004
IEEE
168views Visualization» more  VIS 2004»
15 years 11 months ago
On the Role of Color in the Perception of Motion in Animated Visualizations
Although luminance contrast plays a predominant role in motion perception, significant additional effects are introduced by chromatic contrasts. In this paper, relevant results fr...
Daniel Weiskopf
SDM
2012
SIAM
237views Data Mining» more  SDM 2012»
13 years 2 days ago
A Distributed Kernel Summation Framework for General-Dimension Machine Learning
Kernel summations are a ubiquitous key computational bottleneck in many data analysis methods. In this paper, we attempt to marry, for the first time, the best relevant technique...
Dongryeol Lee, Richard W. Vuduc, Alexander G. Gray