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BMCBI
2005
246views more  BMCBI 2005»
14 years 9 months ago
ParPEST: a pipeline for EST data analysis based on parallel computing
Background: Expressed Sequence Tags (ESTs) are short and error-prone DNA sequences generated from the 5' and 3' ends of randomly selected cDNA clones. They provide an im...
Nunzio D'Agostino, Mario Aversano, Maria Luisa Chi...
ICPP
2007
IEEE
15 years 3 months ago
Toward Automatic Data Distribution for Migrating Computations
Program parallelization requires mapping computation and data to processing elements. Navigational Programming (NavP), based on the principle of migrating computations, offers a d...
Lei Pan, Jingling Xue, Ming Kin Lai, Michael B. Di...
SIGMOD
2007
ACM
179views Database» more  SIGMOD 2007»
15 years 9 months ago
How to barter bits for chronons: compression and bandwidth trade offs for database scans
Two trends are converging to make the CPU cost of a table scan a more important component of database performance. First, table scans are becoming a larger fraction of the query p...
Allison L. Holloway, Vijayshankar Raman, Garret Sw...
SIGMOD
2002
ACM
172views Database» more  SIGMOD 2002»
15 years 9 months ago
Automating physical database design in a parallel database
Physical database design is important for query performance in a shared-nothing parallel database system, in which data is horizontally partitioned among multiple independent node...
Jun Rao, Chun Zhang, Nimrod Megiddo, Guy M. Lohman
EDBT
2009
ACM
90views Database» more  EDBT 2009»
15 years 2 months ago
Parallelization of XPath queries using multi-core processors: challenges and experiences
In this study, we present experiences of parallelizing XPath queries using the Xalan XPath engine on shared-address space multi-core systems. For our evaluation, we consider a sce...
Rajesh Bordawekar, Lipyeow Lim, Oded Shmueli