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» External Memory Algorithms for String Problems
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PODS
2006
ACM
95views Database» more  PODS 2006»
15 years 11 months ago
Randomized computations on large data sets: tight lower bounds
We study the randomized version of a computation model (introduced in [9, 10]) that restricts random access to external memory and internal memory space. Essentially, this model c...
André Hernich, Martin Grohe, Nicole Schweik...
IPPS
1999
IEEE
15 years 3 months ago
Reducing I/O Complexity by Simulating Coarse Grained Parallel Algorithms
Block-wise access to data is a central theme in the design of efficient external memory (EM) algorithms. A second important issue, when more than one disk is present, is fully par...
Frank K. H. A. Dehne, David A. Hutchinson, Anil Ma...
STACS
1992
Springer
15 years 3 months ago
Speeding Up Two String-Matching Algorithms
We show how to speed up two string-matching algorithms: the Boyer-Moore algorithm (BM algorithm), and its version called here the reverse factor algorithm (RF algorithm). The RF al...
Maxime Crochemore, Thierry Lecroq, Artur Czumaj, L...
CIKM
2009
Springer
15 years 3 months ago
Suffix trees for very large genomic sequences
A suffix tree is a fundamental data structure for string searching algorithms. Unfortunately, when it comes to the use of suffix trees in real-life applications, the current metho...
Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upt...
SODA
2012
ACM
174views Algorithms» more  SODA 2012»
13 years 2 months ago
Using hashing to solve the dictionary problem
We consider the dictionary problem in external memory and improve the update time of the wellknown buffer tree by roughly a logarithmic factor. For any λ ≥ max{lg lg n, logM/B(...
John Iacono, Mihai Patrascu