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» Extracting Approximate Patterns
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FPGA
2008
ACM
174views FPGA» more  FPGA 2008»
15 years 4 months ago
Pattern-based behavior synthesis for FPGA resource reduction
Pattern-based synthesis has drawn wide interest from researchers who tried to utilize the regularity in applications for design optimizations. In this paper we present a general p...
Jason Cong, Wei Jiang
IJCAI
2007
15 years 4 months ago
A Flexible Unsupervised PP-Attachment Method Using Semantic Information
In this paper we revisit the classical NLP problem of prepositional phrase attachment (PPattachment). Given the pattern V −NP1−P −NP2 in the text, where V is verb, NP1 is a ...
Srinivas Medimi, Pushpak Bhattacharyya
116
Voted
BMCBI
2010
110views more  BMCBI 2010»
15 years 2 months ago
Towards the systematic discovery of signal transduction networks using phosphorylation dynamics data
Background: Phosphorylation is a ubiquitous and fundamental regulatory mechanism that controls signal transduction in living cells. The number of identified phosphoproteins and th...
Haruna Imamura, Nozomu Yachie, Rintaro Saito, Yasu...
BMCBI
2010
127views more  BMCBI 2010»
15 years 2 months ago
PeptideMine - A webserver for the design of peptides for protein-peptide binding studies derived from protein-protein interactom
Background: Signal transduction events often involve transient, yet specific, interactions between structurally conserved protein domains and polypeptide sequences in target prote...
Khader Shameer, Lalima L. Madan, Shivamurthy Veera...
121
Voted
BMCBI
2006
113views more  BMCBI 2006»
15 years 2 months ago
GibbsST: a Gibbs sampling method for motif discovery with enhanced resistance to local optima
Background: Computational discovery of transcription factor binding sites (TFBS) is a challenging but important problem of bioinformatics. In this study, improvement of a Gibbs sa...
Kazuhito Shida