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117
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BMCBI
2005
151views more  BMCBI 2005»
15 years 22 days ago
stam - a Bioconductor compliant R package for structured analysis of microarray data
Background: Genome wide microarray studies have the potential to unveil novel disease entities. Clinically homogeneous groups of patients can have diverse gene expression profiles...
Claudio Lottaz, Rainer Spang
126
Voted
BMCBI
2005
151views more  BMCBI 2005»
15 years 22 days ago
ProMiner: rule-based protein and gene entity recognition
Background: Identification of gene and protein names in biomedical text is a challenging task as the corresponding nomenclature has evolved over time. This has led to multiple syn...
Daniel Hanisch, Katrin Fundel, Heinz-Theodor Mevis...
124
Voted
BMCBI
2008
108views more  BMCBI 2008»
15 years 29 days ago
An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance
Background: Motif finding algorithms have developed in their ability to use computationally efficient methods to detect patterns in biological sequences. However the posterior cla...
Ana C. Casimiro, Susana Vinga, Ana T. Freitas, Arl...
ECIR
2003
Springer
15 years 2 months ago
A Machine Learning Approach for the Curation of Biomedical Literature
In this paper, we present an automated text classification system for the classification of biomedical papers. This classification is based on whether there is experimental eviden...
Min Shi, David S. Edwin, Rakesh Menon, Lixiang She...
BMCBI
2010
178views more  BMCBI 2010»
15 years 29 days ago
Selecting high-dimensional mixed graphical models using minimal AIC or BIC forests
Background: Chow and Liu showed that the maximum likelihood tree for multivariate discrete distributions may be found using a maximum weight spanning tree algorithm, for example K...
David Edwards, Gabriel C. G. de Abreu, Rodrigo Lab...