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» Extracting Patterns and Relations from the World Wide Web
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OTM
2007
Springer
14 years 12 days ago
Translating XPath Queries into SPARQL Queries
Abstract The W3C has developed XPath [3] as a query language for XML data. XPath is embedded in many other languages like XQuery and XSLT. The name of XPath derives from its basic ...
Matthias Droop, Markus Flarer, Jinghua Groppe, Sve...
BMCBI
2002
126views more  BMCBI 2002»
13 years 6 months ago
RIO: Analyzing proteomes by automated phylogenomics using resampled inference of orthologs
Background: When analyzing protein sequences using sequence similarity searches, orthologous sequences (that diverged by speciation) are more reliable predictors of a new protein&...
Christian M. Zmasek, Sean R. Eddy
ALMOB
2007
74views more  ALMOB 2007»
13 years 6 months ago
Evaluating deterministic motif significance measures in protein databases
Background: Assessing the outcome of motif mining algorithms is an essential task, as the number of reported motifs can be very large. Significance measures play a central role in...
Pedro Gabriel Ferreira, Paulo J. Azevedo
BIBE
2006
IEEE
139views Bioinformatics» more  BIBE 2006»
14 years 10 days ago
A Computational Inference Framework for analyzing Gene Regulation Pathway using Microarray Data
Microarray experiments produce gene expression data at such a high speed and volume that it is imperative to use highly specialized computational tools for their analyses. One grou...
Dong-Guk Shin, John Bluis, Yoo Ah Kim, Winfried Kr...
IWANN
2009
Springer
14 years 25 days ago
Identifying Gene Ontology Areas for Automated Enrichment
Biomedical ontologies provide a commonly accepted scheme for the characterization of biological concepts that enable knowledge sharing and integration. Updating and maintaining an ...
Catia Pesquita, Tiago Grego, Francisco M. Couto