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» Extracting Regulatory Gene Expression Networks From Pubmed
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BMCBI
2010
172views more  BMCBI 2010»
14 years 12 months ago
Inferring gene regression networks with model trees
Background: Novel strategies are required in order to handle the huge amount of data produced by microarray technologies. To infer gene regulatory networks, the first step is to f...
Isabel A. Nepomuceno-Chamorro, Jesús S. Agu...
FUIN
2007
109views more  FUIN 2007»
14 years 11 months ago
Unifying Framework for Rule Semantics: Application to Gene Expression Data
Abstract. The notion of rules is very popular and appears in different flavors, for example as association rules in data mining or as functional dependencies in databases. Their s...
Marie Agier, Jean-Marc Petit, Einoshin Suzuki
BMCBI
2010
156views more  BMCBI 2010»
14 years 12 months ago
Global screening of potential Candida albicans biofilm-related transcription factors via network comparison
Background: Candida albicans is a commonly encountered fungal pathogen in humans. The formation of biofilm is a major virulence factor in C. albicans pathogenesis and is related t...
Yu-Chao Wang, Chung-Yu Lan, Wen-Ping Hsieh, Luis A...
NAR
2002
141views more  NAR 2002»
14 years 11 months ago
Co-expression pattern from DNA microarray experiments as a tool for operon prediction
The prediction of operons, the smallest unit of transcription in prokaryotes, is the first step towards reconstruction of a regulatory network at the whole genome level. Sequence ...
Chiara Sabatti, Lars Rohlin, Min-Kyu Oh, James C. ...
JMLR
2012
13 years 2 months ago
Bayesian regularization of non-homogeneous dynamic Bayesian networks by globally coupling interaction parameters
To relax the homogeneity assumption of classical dynamic Bayesian networks (DBNs), various recent studies have combined DBNs with multiple changepoint processes. The underlying as...
Marco Grzegorczyk, Dirk Husmeier