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» Extraction of informative genes from microarray data
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141
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BMCBI
2010
153views more  BMCBI 2010»
15 years 3 months ago
Starr: Simple Tiling ARRay analysis of Affymetrix ChIP-chip data
Background: Chromatin immunoprecipitation combined with DNA microarrays (ChIP-chip) is an assay used for investigating DNA-protein-binding or post-translational chromatin/histone ...
Benedikt Zacher, Pei Fen Kuan, Achim Tresch
120
Voted
BMCBI
2006
82views more  BMCBI 2006»
15 years 3 months ago
Transcriptomic response to differentiation induction
Background: Microarrays used for gene expression studies yield large amounts of data. The processing of such data typically leads to lists of differentially-regulated genes. A com...
G. W. Patton, Robert M. Stephens, I. A. Sidorov, X...
127
Voted
KDD
2002
ACM
183views Data Mining» more  KDD 2002»
16 years 4 months ago
E-CAST: A Data Mining Algorithm for Gene Expression Data
Data clustering methods have been proven to be a successful data mining technique in the analysis of gene expression data. The Cluster affinity search technique (CAST) developed b...
Abdelghani Bellaachia, David Portnoy, Yidong Chen,...
161
Voted
AIMSA
2004
Springer
15 years 9 months ago
PubMiner: Machine Learning-Based Text Mining System for Biomedical Information Mining
PubMiner, an intelligent machine learning based text mining system for mining biological information from the literature is introduced. PubMiner utilize natural language processing...
Jae-Hong Eom, Byoung-Tak Zhang
133
Voted
BMCBI
2008
107views more  BMCBI 2008»
15 years 3 months ago
A mixture model approach to sample size estimation in two-sample comparative microarray experiments
Background: Choosing the appropriate sample size is an important step in the design of a microarray experiment, and recently methods have been proposed that estimate sample sizes ...
Tommy S. Jørstad, Herman Midelfart, Atle M....