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» Extraction of informative genes from microarray data
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AAAI
2000
15 years 5 months ago
A Mutually Beneficial Integration of Data Mining and Information Extraction
Text mining concerns applying data mining techniques to unstructured text. Information extraction (IE) is a form of shallow text understanding that locates specific pieces of data...
Un Yong Nahm, Raymond J. Mooney
BMCBI
2007
124views more  BMCBI 2007»
15 years 3 months ago
BioInfer: a corpus for information extraction in the biomedical domain
Background: Lately, there has been a great interest in the application of information extraction methods to the biomedical domain, in particular, to the extraction of relationship...
Sampo Pyysalo, Filip Ginter, Juho Heimonen, Jari B...
IADIS
2008
15 years 5 months ago
Sisa: Seeded Iterative Signature Algorithm for Biclustering Gene Expression Data
One approach to reduce the complexity of the task in the analysis of large scale genome-wide expression is to group the genes showing similar expression patterns into what are cal...
Neelima Gupta, Seema Aggarwal
BMCBI
2010
160views more  BMCBI 2010»
15 years 3 months ago
Annotation of gene promoters by integrative data-mining of ChIP-seq Pol-II enrichment data
Background: Use of alternative gene promoters that drive widespread cell-type, tissue-type or developmental gene regulation in mammalian genomes is a common phenomenon. Chromatin ...
Ravi Gupta, Priyankara Wikramasinghe, Anirban Bhat...
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BIBE
2005
IEEE
115views Bioinformatics» more  BIBE 2005»
15 years 9 months ago
GOMIT: A Generic and Adaptive Annotation Algorithm Based on Gene Ontology Term Distributions
We address the issue of providing highly informative annotations using information revealed by the structured vocabularies of Gene Ontology (GO). For a target, a set of candidate ...
In-Yee Lee, Jan-Ming Ho, Ming-Syan Chen