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» Extraction of informative genes from microarray data
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ICASSP
2011
IEEE
14 years 7 months ago
Uncover cooperative gene regulations by microRNAs and transcription factors in glioblastoma using a nonnegative hybrid factor mo
—Transcriptional regulation by transcription factors (TFs) and microRNAs controls when and how much RNA is created. Due to technical limitations, the protein level expressions of...
Jia Meng, Hung-I Harry Chen, Jianqiu Zhang, Yidong...
BMCBI
2010
106views more  BMCBI 2010»
14 years 11 months ago
Identification and correction of previously unreported spatial phenomena using raw Illumina BeadArray data
Background: A key stage for all microarray analyses is the extraction of feature-intensities from an image. If this step goes wrong, then subsequent preprocessing and processing s...
Mike L. Smith, Mark J. Dunning, Simon Tavaré...
129
Voted
DEBU
2000
95views more  DEBU 2000»
15 years 3 months ago
Accurately and Reliably Extracting Data from the Web: A Machine Learning Approach
A critical problem in developing information agents for the Web is accessing data that is formatted for human use. We have developed a set of tools for extracting data from web si...
Craig A. Knoblock, Kristina Lerman, Steven Minton,...
BMCBI
2005
145views more  BMCBI 2005»
15 years 3 months ago
CAGER: classification analysis of gene expression regulation using multiple information sources
Background: Many classification approaches have been applied to analyzing transcriptional regulation of gene expressions. These methods build models that can explain a gene's...
Jianhua Ruan, Weixiong Zhang
BMCBI
2007
120views more  BMCBI 2007»
15 years 4 months ago
Recognition of interferon-inducible sites, promoters, and enhancers
Background: Computational analysis of gene regulatory regions is important for prediction of functions of many uncharacterized genes. With this in mind, search of the target genes...
Elena A. Ananko, Yury V. Kondrakhin, Tatyana I. Me...