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» Extraction of informative genes from microarray data
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141
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NAR
2000
117views more  NAR 2000»
15 years 3 months ago
The TIGR Gene Indices: reconstruction and representation of expressed gene sequences
Expressed sequence tags (ESTs) have provided a first glimpse of the collection of transcribed sequences in a variety of organisms. However, a careful analysis of this sequence dat...
John Quackenbush, Feng Liang, Ingeborg Holt, Geo P...
199
Voted
SIGMOD
2008
ACM
92views Database» more  SIGMOD 2008»
16 years 4 months ago
Information extraction challenges in managing unstructured data
Over the past few years, we have been trying to build an end-to-end system at Wisconsin to manage unstructured data, using extraction, integration, and user interaction. This pape...
AnHai Doan, Jeffrey F. Naughton, Raghu Ramakrishna...
BMCBI
2007
135views more  BMCBI 2007»
15 years 4 months ago
Detecting multivariate differentially expressed genes
Background: Gene expression is governed by complex networks, and differences in expression patterns between distinct biological conditions may therefore be complex and multivariat...
Roland Nilsson, José M. Peña, Johan ...
149
Voted
ISBI
2011
IEEE
14 years 7 months ago
Automated lineage tree reconstruction from Caenorhabditis elegans image data using particle filtering based cell tracking
Caenorhabditis elegans is an important model organism for the study of molecular mechanisms of development and disease processes, due to its well-known genome and invariant cell l...
Noemí Carranza-Herrezuelo, Ihor Smal, Oleh ...
BMCBI
2008
171views more  BMCBI 2008»
15 years 4 months ago
Fuzzy association rules for biological data analysis: A case study on yeast
Background: Last years' mapping of diverse genomes has generated huge amounts of biological data which are currently dispersed through many databases. Integration of the info...
Francisco J. Lopez, Armando Blanco, Fernando Garci...