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» Extraction of informative genes from microarray data
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BIBE
2003
IEEE
121views Bioinformatics» more  BIBE 2003»
15 years 9 months ago
Time Series Analysis of Gene Expression and Location Data
We develop a method for integrating time series expression profiles and factor-gene binding data to quantify dynamic aspects of gene regulation. We estimate latencies for transcr...
Chen-Hsiang Yeang, Tommi Jaakkola
BMCBI
2010
110views more  BMCBI 2010»
15 years 4 months ago
Concept-based query expansion for retrieving gene related publications from MEDLINE
Background: Advances in biotechnology and in high-throughput methods for gene analysis have contributed to an exponential increase in the number of scientific publications in thes...
Sérgio Matos, Joel Arrais, João Maia...
MASCOTS
2008
15 years 5 months ago
Evaluating the Effectiveness of Information Extraction in Real-World Storage Management
As storage deployments within enterprises continue to grow, there is an increasing need to simplify and automate. Existing tools for automation rely on extracting information in t...
Aameek Singh, Sandeep Uttamchandani, Yin Wang
BIOCOMP
2008
15 years 5 months ago
Reverse Engineering Module Networks by PSO-RNN Hybrid Modeling
Background: Inferring a gene regulatory network (GRN) from high throughput biological data is often an under-determined problem and is a challenging task due to the following reas...
Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
DEXAW
2003
IEEE
131views Database» more  DEXAW 2003»
15 years 9 months ago
Having a BLAST: Analyzing Gene Sequence Data with BlastQuest
An essential problem for biologists is the processing and evaluation of BLAST results. We advocate the deployment of database technology and describe a userdriven tool, called Bla...
William G. Farmerie, Joachim Hammer, Li Liu, Marku...