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» Extraction of informative genes from microarray data
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BMCBI
2002
126views more  BMCBI 2002»
15 years 3 months ago
RIO: Analyzing proteomes by automated phylogenomics using resampled inference of orthologs
Background: When analyzing protein sequences using sequence similarity searches, orthologous sequences (that diverged by speciation) are more reliable predictors of a new protein&...
Christian M. Zmasek, Sean R. Eddy
SIGKDD
2002
92views more  SIGKDD 2002»
15 years 3 months ago
A Machine Learning Approach for the Curation of Biomedical Literature - KDD Cup 2002 (Task 1)
In this paper, we present an automated text classification system for the classification of biomedical papers. This classification is based on whether there is experimental eviden...
S. Sathiya Keerthi, Chong Jin Ong, Keng Boon Siah,...
ER
2003
Springer
98views Database» more  ER 2003»
15 years 9 months ago
Extracting Relations from XML Documents
XML is becoming a prevalent format for data exchange. Many XML documents have complex schemas that are not always known, and can vary widely between information sources and applica...
Eugene Agichtein, C. T. Howard Ho, Vanja Josifovsk...
BMCBI
2004
144views more  BMCBI 2004»
15 years 3 months ago
PASBio: predicate-argument structures for event extraction in molecular biology
Background: The exploitation of information extraction (IE), a technology aiming to provide instances of structured representations from free-form text, has been rapidly growing w...
Tuangthong Wattarujeekrit, Parantu K. Shah, Nigel ...
BIOINFORMATICS
2006
118views more  BIOINFORMATICS 2006»
15 years 4 months ago
A probabilistic dynamical model for quantitative inference of the regulatory mechanism of transcription
Motivation Quantitative estimation of the regulatory relationship between transcription factors and genes is a fundamental stepping stone when trying to develop models of cellular...
Guido Sanguinetti, Magnus Rattray, Neil D. Lawrenc...