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» Extraction of informative genes from microarray data
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NAR
2008
74views more  NAR 2008»
15 years 4 months ago
Gene Ontology annotations at SGD: new data sources and annotation methods
The Saccharomyces Genome Database (SGD; http:// www.yeastgenome.org/) collects and organizes biological information about the chromosomal features and gene products of the budding...
Eurie L. Hong, Rama Balakrishnan, Qing Dong, Karen...
BMCBI
2008
187views more  BMCBI 2008»
15 years 4 months ago
PSAT: A web tool to compare genomic neighborhoods of multiple prokaryotic genomes
Background: The conservation of gene order among prokaryotic genomes can provide valuable insight into gene function, protein interactions, or events by which genomes have evolved...
Christine Fong, Laurence Rohmer, Matthew Radey, Mi...
SIGMOD
2000
ACM
236views Database» more  SIGMOD 2000»
15 years 8 months ago
XTRACT: A System for Extracting Document Type Descriptors from XML Documents
XML is rapidly emerging as the new standard for data representation and exchange on the Web. An XML document can be accompanied by a Document Type Descriptor (DTD) which plays the...
Minos N. Garofalakis, Aristides Gionis, Rajeev Ras...
ICDE
2003
IEEE
149views Database» more  ICDE 2003»
16 years 5 months ago
Indexing Weighted-Sequences in Large Databases
We present an index structure for managing weightedsequences in large databases. A weighted-sequence is defined as a two-dimensional structure where each element in the sequence i...
Haixun Wang, Chang-Shing Perng, Wei Fan, Sanghyun ...
BMCBI
2010
105views more  BMCBI 2010»
15 years 4 months ago
Evaluation of fecal mRNA reproducibility via a marginal transformed mixture modeling approach
Background: Developing and evaluating new technology that enables researchers to recover gene-expression levels of colonic cells from fecal samples could be key to a non-invasive ...
Nysia I. George, Joanne R. Lupton, Nancy D. Turner...