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» Extraction of informative genes from microarray data
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IJCSA
2007
98views more  IJCSA 2007»
15 years 3 months ago
Extracted Knowledge Interpretation in mining biological data: a survey
This paper discusses different approaches for integrating biological knowledge in gene expression analysis. Indeed we are interested in the fifth step of microarray analysis pro...
Martine Collard, Ricardo Martínez
BMCBI
2006
138views more  BMCBI 2006»
15 years 3 months ago
Determination of strongly overlapping signaling activity from microarray data
Background: As numerous diseases involve errors in signal transduction, modern therapeutics often target proteins involved in cellular signaling. Interpretation of the activity of...
Ghislain Bidaut, Karsten Suhre, Jean-Michel Claver...
BMCBI
2006
103views more  BMCBI 2006»
15 years 3 months ago
Probe-level linear model fitting and mixture modeling results in high accuracy detection of differential gene expression
Background: The identification of differentially expressed genes (DEGs) from Affymetrix GeneChips arrays is currently done by first computing expression levels from the low-level ...
Sébastien Lemieux
AIME
2007
Springer
15 years 9 months ago
Interpreting Gene Expression Data by Searching for Enriched Gene Sets
This paper presents a novel method integrating gene-gene interaction information and Gene Ontology for the construction of new gene sets that are potentially enriched. Enrichment o...
Igor Trajkovski, Nada Lavrac
BMCBI
2005
130views more  BMCBI 2005»
15 years 3 months ago
MiMiR: a comprehensive solution for storage, annotation and exchange of microarray data
Background: The generation of large amounts of microarray data presents challenges for data collection, annotation, exchange and analysis. Although there are now widely accepted f...
Mahendra Navarange, Laurence Game, Derek Fowler, V...