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» Extraction of informative genes from microarray data
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119
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BMCBI
2006
131views more  BMCBI 2006»
15 years 3 months ago
The statistics of identifying differentially expressed genes in Expresso and TM4: a comparison
Background: Analysis of DNA microarray data takes as input spot intensity measurements from scanner software and returns differential expression of genes between two conditions, t...
Allan A. Sioson, Shrinivasrao P. Mane, Pinghua Li,...
154
Voted
BMCBI
2004
124views more  BMCBI 2004»
15 years 3 months ago
Tests for finding complex patterns of differential expression in cancers: towards individualized medicine
Background: Microarray studies in cancer compare expression levels between two or more sample groups on thousands of genes. Data analysis follows a population-level approach (e.g....
James Lyons-Weiler, Satish Patel, Michael J. Becic...
138
Voted
CBMS
2007
IEEE
15 years 10 months ago
Influence of Dictionary Size on the Lossless Compression of Microarray Images
A key challenge in the management of microarray data is the large size of images that constitute the output of microarray experiments. Therefore, only the expression values extrac...
Robert Bierman, Rahul Singh
143
Voted
BMCBI
2005
189views more  BMCBI 2005»
15 years 3 months ago
A sentence sliding window approach to extract protein annotations from biomedical articles
Background: Within the emerging field of text mining and statistical natural language processing (NLP) applied to biomedical articles, a broad variety of techniques have been deve...
Martin Krallinger, Maria Padron, Alfonso Valencia
168
Voted
BMCBI
2002
214views more  BMCBI 2002»
15 years 3 months ago
Automated modelling of signal transduction networks
Background: Intracellular signal transduction is achieved by networks of proteins and small molecules that transmit information from the cell surface to the nucleus, where they ul...
Martin Steffen, Allegra Petti, John Aach, Patrik D...