In this paper we present a rapid prototyping platform on a single Field Programmable Gate Array (FPGA) with support for software transactional memory. The system is composed only b...
Matching and searching computations play an important role in the indexing of data. These computations are typically encoded in very tight loops with a single index variable and a...
In this paper we describe our design and characterization of a co-processor architecture to accelerate median-based phylogenetic reconstruction for generearrangement data. Our curr...
The term scalability appears frequently in computing literature, but it is a term that is poorly defined and poorly understood. The lack of a clear, consistent and systematic trea...
The effect of the operating system on application performance is an increasingly important consideration in high performance computing. OS kernel measurement is key to understandi...
Aroon Nataraj, Allen D. Malony, Sameer Shende, Ala...