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» FRESCO: Flexible Alignment with Rectangle Scoring Schemes
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63
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PSB
2008
15 years 2 months ago
FRESCO: Flexible Alignment with Rectangle Scoring Schemes
Adrian V. Dalca, Michael Brudno
115
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BMCBI
2007
149views more  BMCBI 2007»
15 years 23 days ago
SAMPI: Protein Identification with Mass Spectra Alignments
Background: Mass spectrometry based peptide mass fingerprints (PMFs) offer a fast, efficient, and robust method for protein identification. A protein is digested (usually by tryps...
Hans-Michael Kaltenbach, Andreas Wilke, Sebastian ...
79
Voted
BMCBI
2007
99views more  BMCBI 2007»
15 years 26 days ago
Flexible mapping of homology onto structure with Homolmapper
Background: Over the past decade, a number of tools have emerged for the examination of homology relationships among protein sequences in a structural context. Most recent softwar...
Nathan C. Rockwell, J. Clark Lagarias
114
Voted
BMCBI
2005
162views more  BMCBI 2005»
15 years 19 days ago
Accelerated probabilistic inference of RNA structure evolution
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
Ian Holmes