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BMCBI
2010
108views more  BMCBI 2010»
14 years 11 months ago
An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs
Background: Transcription factors (TFs) control transcription by binding to specific regions of DNA called transcription factor binding sites (TFBSs). The identification of TFBSs ...
Fernando Garcia-Alcalde, Armando Blanco, Adrian J....
BMCBI
2008
159views more  BMCBI 2008»
14 years 11 months ago
Multivariate hierarchical Bayesian model for differential gene expression analysis in microarray experiments
Background: Identification of differentially expressed genes is a typical objective when analyzing gene expression data. Recently, Bayesian hierarchical models have become increas...
Hongya Zhao, Kwok-Leung Chan, Lee-Ming Cheng, Hong...
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BMCBI
2005
150views more  BMCBI 2005»
14 years 11 months ago
Discover protein sequence signatures from protein-protein interaction data
Background: The development of high-throughput technologies such as yeast two-hybrid systems and mass spectrometry technologies has made it possible to generate large protein-prot...
Jianwen Fang, Ryan J. Haasl, Yinghua Dong, Gerald ...
CORR
2011
Springer
202views Education» more  CORR 2011»
14 years 6 months ago
High Degree Vertices, Eigenvalues and Diameter of Random Apollonian Networks
ABSTRACT. Upon the discovery of power laws [8, 16, 30], a large body of work in complex network analysis has focused on developing generative models of graphs which mimick real-wor...
Alan M. Frieze, Charalampos E. Tsourakakis
SIAMCOMP
2011
14 years 6 months ago
The Complexity of Early Deciding Set Agreement
Set agreement, where processors decisions constitute a set of outputs, is notoriously harder to analyze than consensus where the decisions are restricted to a single output. This ...
Eli Gafni, Rachid Guerraoui, Bastian Pochon