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125
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NAR
2011
204views Computer Vision» more  NAR 2011»
14 years 6 months ago
CLIPZ: a database and analysis environment for experimentally determined binding sites of RNA-binding proteins
The stability, localization and translation rate of mRNAs are regulated by a multitude of RNAbinding proteins (RBPs) that find their targets directly or with the help of guide RNA...
Mohsen Khorshid, Christoph Rodak, Mihaela Zavolan
141
Voted
RECOMB
2003
Springer
16 years 3 months ago
Modeling dependencies in protein-DNA binding sites
The availability of whole genome sequences and high-throughput genomic assays opens the door for in silico analysis of transcription regulation. This includes methods for discover...
Yoseph Barash, Gal Elidan, Nir Friedman, Tommy Kap...
131
Voted
ACMSE
2007
ACM
15 years 7 months ago
Finding association rules of cis-regulatory elements involved in alternative splicing
Alternative splicing (AS) is a major mechanism to generate protein diversity. A single gene might generate hundreds or even thousands of different proteins. Recently, powerful lar...
Jihye Kim, Sihui Zhao, Steffen Heber
118
Voted
ASPDAC
2001
ACM
130views Hardware» more  ASPDAC 2001»
15 years 7 months ago
Area/delay estimation for digital signal processor cores
Hardware/software partitioning is one of the key processes in a hardware/software cosynthesis system for digital signal processor cores. In hardware/software partitioning, area and...
Yuichiro Miyaoka, Yoshiharu Kataoka, Nozomu Togawa...
HPCA
2002
IEEE
16 years 3 months ago
Using Complete Machine Simulation for Software Power Estimation: The SoftWatt Approach
Power dissipation has become one of the most critical factors for the continued development of both high-end and low-end computer systems. The successful design and evaluation of ...
Sudhanva Gurumurthi, Anand Sivasubramaniam, Mary J...