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2000
15 years 1 months ago
Accelerating Protein Classification Using Suffix Trees
Position-specific scoring matrices have been used extensively to recognize highly conserved protein regions. We present a method for accelerating these searches using a suffix tre...
Bogdan Dorohonceanu, Craig G. Nevill-Manning
SLP
1989
105views more  SLP 1989»
15 years 1 months ago
Automatic Ordering of Subgoals - A Machine Learning Approach
This paper describes a learning system, LASSY1, which explores domains represented by Prolog databases, and use its acquired knowledge to increase the efficiency of a Prolog inter...
Shaul Markovitch, Paul D. Scott
HPDC
2010
IEEE
15 years 28 days ago
Exploring the RNA folding energy landscape using scalable distributed cyberinfrastructure
The increasing significance of RNAs in transcriptional or post-transcriptional gene regulation processes has generated considerable interest towards the prediction of RNA folding ...
Joohyun Kim, Wei Huang, Sharath Maddineni, Fareed ...
CANDC
2008
ACM
14 years 12 months ago
In silico identification of the protein disulfide isomerase family from a protozoan parasite
Protein disulfide isomerase (PDI) enzymes are eukaryotic oxidoreductases that catalyze the correct formation of disulfide bonds during protein folding. Structurally they are chara...
Marco A. Ramos, Rosa E. Mares, Paloma D. Maga&ntil...
PRL
2008
126views more  PRL 2008»
14 years 11 months ago
Fourier-based geometric shape prior for snakes
A novel method of snakes with shape prior is presented in this paper. We propose to add a new force which makes the curve evolve to particular shape corresponding to a template to...
Mohamed Ali Charmi, Stéphane Derrode, Faouz...