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BMCBI
2007
148views more  BMCBI 2007»
14 years 9 months ago
WeederH: an algorithm for finding conserved regulatory motifs and regions in homologous sequences
Background: This work addresses the problem of detecting conserved transcription factor binding sites and in general regulatory regions through the analysis of sequences from homo...
Giulio Pavesi, Federico Zambelli, Graziano Pesole
BMCBI
2005
130views more  BMCBI 2005»
14 years 9 months ago
Some statistical properties of regulatory DNA sequences, and their use in predicting regulatory regions in the Drosophila genome
Background: This paper addresses the problem of recognising DNA cis-regulatory modules which are located far from genes. Experimental procedures for this are slow and costly, and ...
Irina I. Abnizova, Rene te Boekhorst, Klaudia Walt...
BIBE
2007
IEEE
142views Bioinformatics» more  BIBE 2007»
15 years 4 months ago
An HV-SVM Classifier to Infer TF-TF Interactions Using Protein Domains and GO Annotations
—Interactions between transcription factors (TFs) are necessary for deciphering the complex mechanisms of transcription regulation in eukaryotes. In this paper, we proposed a nov...
Xiaoli Li, Jun-Xiang Lee, Bharadwaj Veeravalli, Se...
ICCV
2005
IEEE
15 years 3 months ago
A Unifying Approach to Hard and Probabilistic Clustering
We derive the clustering problem from first principles showing that the goal of achieving a probabilistic, or ”hard”, multi class clustering result is equivalent to the algeb...
Ron Zass, Amnon Shashua
CVPR
2003
IEEE
15 years 11 months ago
Practical Non-parametric Density Estimation on a Transformation Group for Vision
It is now common practice in machine vision to define the variability in an object's appearance in a factored manner, as a combination of shape and texture transformations. I...
Erik G. Miller, Christophe Chefd'Hotel